No. words: 492; after pruning: 466


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.6 -0.6 (1,1:335)   67  7.77 0.97 0.97  UCW053_A12_BE590865Sn26P001B08P022C051F1_096.ab1      235   337 (52)  C UCW054_A12_BE590865Sn26P001B08P022C051R1_096.ab1   (0)   103     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.6       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  38 nodes

 21 str. conn. components

Path
    1    UCW053_A12_BE590865Sn26P001B08P022C051F1_096.ab1     1 
Contig length: old 389, new 389

Contig length: old 389, new 389
New start: 0