No. words: 714; after pruning: 688


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -1.1 -1.1 (1,1:353)  280  2.81 0.31 0.31  UCW053_G12_BE590865Sn32P001B08P022C051F1_084.ab1       36   355 (39)  C UCW054_G12_BE590865Sn32P001B08P022C051R1_084.ab1   (0)   320     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.1       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  130 nodes

 67 str. conn. components

Path
    1    UCW053_G12_BE590865Sn32P001B08P022C051F1_084.ab1     1 
Contig length: old 394, new 394

Contig length: old 394, new 394
New start: 0