No. words: 517; after pruning: 491


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.6 -0.6 (1,1:361)   95  0.00 0.00 1.83  UCW053_A10_BE590865Ta11P001B08P022C051F1_080.ab1      255   363 (47)  C UCW054_A10_BE590865Ta11P001B08P022C051R1_080.ab1   (0)   107     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.6       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  50 nodes

 27 str. conn. components

Path
    1    UCW053_A10_BE590865Ta11P001B08P022C051F1_080.ab1     1 
  279  C UCW054_A10_BE590865Ta11P001B08P022C051R1_080.ab1    83 
  287    UCW053_A10_BE590865Ta11P001B08P022C051F1_080.ab1   287 
  291  C UCW054_A10_BE590865Ta11P001B08P022C051R1_080.ab1    71 
  303    UCW053_A10_BE590865Ta11P001B08P022C051F1_080.ab1   303 
Contig length: old 410, new 410

Contig length: old 410, new 410
New start: 0