No. words: 1291; after pruning: 1265


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:806)  474  0.21 0.00 0.00  UCW001F_E07_BE591275Ld05P002G04G101F1_051.ab1      155   638 (0)  C UCW001R_E07_BE591275Ld05P002G04G101R1_051.ab1   (0)   653   170 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1    UCW001F_E07_BE591275Ld05P002G04G101F1_051.ab1     1 
  358  C UCW001R_E07_BE591275Ld05P002G04G101R1_051.ab1   450 
  362    UCW001F_E07_BE591275Ld05P002G04G101F1_051.ab1   362 
  370  C UCW001R_E07_BE591275Ld05P002G04G101R1_051.ab1   438 
  374    UCW001F_E07_BE591275Ld05P002G04G101F1_051.ab1   374 
  382  C UCW001R_E07_BE591275Ld05P002G04G101R1_051.ab1   426 
Contig length: old 807, new 807

Contig length: old 807, new 807
New start: 0