No. words: 1405; after pruning: 1379


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:804)  590  0.00 0.00 0.00  UCW001F_F07_BE591275Ld06P002G04G101F1_059.ab1       87   686 (0)  C UCW001R_F07_BE591275Ld06P002G04G101R1_059.ab1   (0)   719   120 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1    UCW001F_F07_BE591275Ld06P002G04G101F1_059.ab1     1 
  370  C UCW001R_F07_BE591275Ld06P002G04G101R1_059.ab1   436 
  382    UCW001F_F07_BE591275Ld06P002G04G101F1_059.ab1   382 
  386  C UCW001R_F07_BE591275Ld06P002G04G101R1_059.ab1   420 
  390    UCW001F_F07_BE591275Ld06P002G04G101F1_059.ab1   390 
  394  C UCW001R_F07_BE591275Ld06P002G04G101R1_059.ab1   412 
Contig length: old 805, new 805

Contig length: old 805, new 805
New start: 0