No. words: 1551; after pruning: 1511


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:941)  597  0.16 0.00 0.00  UCW033_H09_BE591275Sn24P001G09P022D051R1_065.ab1      223   831 (0)  C UCW034_H09_BE591275Sn24P001G09P022D051F1_065.ab1   (0)   720   112 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1    UCW033_H09_BE591275Sn24P001G09P022D051R1_065.ab1     1 
  442  C UCW034_H09_BE591275Sn24P001G09P022D051F1_065.ab1   501 
  446    UCW033_H09_BE591275Sn24P001G09P022D051R1_065.ab1   446 
  470  C UCW034_H09_BE591275Sn24P001G09P022D051F1_065.ab1   473 
  514    UCW033_H09_BE591275Sn24P001G09P022D051R1_065.ab1   514 
  518  C UCW034_H09_BE591275Sn24P001G09P022D051F1_065.ab1   425 
  550    UCW033_H09_BE591275Sn24P001G09P022D051R1_065.ab1   550 
  554  C UCW034_H09_BE591275Sn24P001G09P022D051F1_065.ab1   389 
  562    UCW033_H09_BE591275Sn24P001G09P022D051R1_065.ab1   562 
  566  C UCW034_H09_BE591275Sn24P001G09P022D051F1_065.ab1   377 
Contig length: old 942, new 942

Contig length: old 942, new 942
New start: 0