No. words: 1370; after pruning: 1344


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:960)  403  0.00 0.00 0.00  UCW033_C12_BE591275Sn28P001G09P022F051R1_092.ab1      263   671 (0)  C UCW034_C12_BE591275Sn28P001G09P022F051F1_092.ab1   (0)   699   291 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1    UCW033_C12_BE591275Sn28P001G09P022F051R1_092.ab1     1 
  450  C UCW034_C12_BE591275Sn28P001G09P022F051F1_092.ab1   512 
  462    UCW033_C12_BE591275Sn28P001G09P022F051R1_092.ab1   462 
  474  C UCW034_C12_BE591275Sn28P001G09P022F051F1_092.ab1   488 
  478    UCW033_C12_BE591275Sn28P001G09P022F051R1_092.ab1   478 
  482  C UCW034_C12_BE591275Sn28P001G09P022F051F1_092.ab1   480 
Contig length: old 961, new 961

Contig length: old 961, new 961
New start: 0