No. words: 1456; after pruning: 1430


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 9.3 (1,1:965)  465  0.41 0.21 0.00  UCW033_A10_BE591275Ta11P001G09P022F051R1_080.ab1      259   742 (0)  C UCW034_A10_BE591275Ta11P001G09P022F051F1_080.ab1   (5)   709   225 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1    UCW033_A10_BE591275Ta11P001G09P022F051R1_080.ab1     1 
  463  C UCW034_A10_BE591275Ta11P001G09P022F051F1_080.ab1   504 
  467    UCW033_A10_BE591275Ta11P001G09P022F051R1_080.ab1   467 
  471  C UCW034_A10_BE591275Ta11P001G09P022F051F1_080.ab1   496 
  475    UCW033_A10_BE591275Ta11P001G09P022F051R1_080.ab1   475 
  483  C UCW034_A10_BE591275Ta11P001G09P022F051F1_080.ab1   484 
  491    UCW033_A10_BE591275Ta11P001G09P022F051R1_080.ab1   491 
  511  C UCW034_A10_BE591275Ta11P001G09P022F051F1_080.ab1   456 
  531    UCW033_A10_BE591275Ta11P001G09P022F051R1_080.ab1   531 
  535  C UCW034_A10_BE591275Ta11P001G09P022F051F1_080.ab1   432 
  543    UCW033_A10_BE591275Ta11P001G09P022F051R1_080.ab1   543 
  547  C UCW034_A10_BE591275Ta11P001G09P022F051F1_080.ab1   420 
  551    UCW033_A10_BE591275Ta11P001G09P022F051R1_080.ab1   551 
  555  C UCW034_A10_BE591275Ta11P001G09P022F051F1_080.ab1   412 
  675    UCW033_A10_BE591275Ta11P001G09P022F051R1_080.ab1   675 
  683  C UCW034_A10_BE591275Ta11P001G09P022F051F1_080.ab1   284 
Contig length: old 966, new 966

Contig length: old 966, new 966
New start: 0