No. words: 1837; after pruning: 1797


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.6 (1,1:927)  880  0.22 0.00 0.11  UCW033_D08_BE591275Ta12P001G09P022D051R1_058.ab1       10   918 (0)  C UCW034_D08_BE591275Ta12P001G09P022D051F1_058.ab1   (0)   919    12 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  446 nodes

 225 str. conn. components

Path
    1    UCW033_D08_BE591275Ta12P001G09P022D051R1_058.ab1     1 
  520  C UCW034_D08_BE591275Ta12P001G09P022D051F1_058.ab1   409 
  572    UCW033_D08_BE591275Ta12P001G09P022D051R1_058.ab1   572 
  620  C UCW034_D08_BE591275Ta12P001G09P022D051F1_058.ab1   309 
  648    UCW033_D08_BE591275Ta12P001G09P022D051R1_058.ab1   648 
  656  C UCW034_D08_BE591275Ta12P001G09P022D051F1_058.ab1   273 
Contig length: old 928, new 928

Contig length: old 928, new 929
New start: 0 
I Change at: 913; seg lengths: entry 1, contig 0