No. words: 1836; after pruning: 1796


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:947)  845  0.34 0.23 0.23  UCW033_E08_BE591275Ta13P001G09P022D051R1_056.ab1       28   915 (0)  C UCW034_E08_BE591275Ta13P001G09P022D051F1_056.ab1   (0)   921    34 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  426 nodes

 215 str. conn. components

Path
    1    UCW033_E08_BE591275Ta13P001G09P022D051R1_056.ab1     1 
   43  C UCW034_E08_BE591275Ta13P001G09P022D051F1_056.ab1   906 
   52    UCW033_E08_BE591275Ta13P001G09P022D051R1_056.ab1    52 
  613  C UCW034_E08_BE591275Ta13P001G09P022D051F1_056.ab1   337 
Contig length: old 948, new 949

Contig length: old 949, new 949
New start: 0