No. words: 1433; after pruning: 1407


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:975)  442  0.22 0.00 0.00  UCW033_C10_BE591275Ta13P001G09P022F051R1_076.ab1      375   831 (0)  C UCW034_C10_BE591275Ta13P001G09P022F051F1_076.ab1   (0)   602   146 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1    UCW033_C10_BE591275Ta13P001G09P022F051R1_076.ab1     1 
  522  C UCW034_C10_BE591275Ta13P001G09P022F051F1_076.ab1   455 
  526    UCW033_C10_BE591275Ta13P001G09P022F051R1_076.ab1   526 
  550  C UCW034_C10_BE591275Ta13P001G09P022F051F1_076.ab1   427 
  554    UCW033_C10_BE591275Ta13P001G09P022F051R1_076.ab1   554 
  602  C UCW034_C10_BE591275Ta13P001G09P022F051F1_076.ab1   375 
  610    UCW033_C10_BE591275Ta13P001G09P022F051R1_076.ab1   610 
  614  C UCW034_C10_BE591275Ta13P001G09P022F051F1_076.ab1   363 
Contig length: old 976, new 976

Contig length: old 976, new 976
New start: 0