No. words: 1715; after pruning: 1689


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.9 (1,1:938)  756  0.26 0.00 0.00  UCW033_F08_BE591275Ta14P001G09P022D051R1_054.ab1       21   796 (0)  C UCW034_F08_BE591275Ta14P001G09P022D051F1_054.ab1   (0)   919   144 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1    UCW033_F08_BE591275Ta14P001G09P022D051R1_054.ab1     1 
  478  C UCW034_F08_BE591275Ta14P001G09P022D051F1_054.ab1   462 
Contig length: old 939, new 939

Contig length: old 939, new 939
New start: 0