No. words: 1573; after pruning: 1547


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:985)  576  0.00 0.00 0.00  UCW033_E10_BE591275Ta15P001G09P022F051R1_072.ab1      206   792 (0)  C UCW034_E10_BE591275Ta15P001G09P022F051F1_072.ab1   (0)   781   195 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1    UCW033_E10_BE591275Ta15P001G09P022F051R1_072.ab1     1 
  397  C UCW034_E10_BE591275Ta15P001G09P022F051F1_072.ab1   590 
  425    UCW033_E10_BE591275Ta15P001G09P022F051R1_072.ab1   425 
  453  C UCW034_E10_BE591275Ta15P001G09P022F051F1_072.ab1   534 
  473    UCW033_E10_BE591275Ta15P001G09P022F051R1_072.ab1   473 
  477  C UCW034_E10_BE591275Ta15P001G09P022F051F1_072.ab1   510 
  493    UCW033_E10_BE591275Ta15P001G09P022F051R1_072.ab1   493 
  497  C UCW034_E10_BE591275Ta15P001G09P022F051F1_072.ab1   490 
  517    UCW033_E10_BE591275Ta15P001G09P022F051R1_072.ab1   517 
  525  C UCW034_E10_BE591275Ta15P001G09P022F051F1_072.ab1   462 
  577    UCW033_E10_BE591275Ta15P001G09P022F051R1_072.ab1   577 
  581  C UCW034_E10_BE591275Ta15P001G09P022F051F1_072.ab1   406 
Contig length: old 986, new 986

Contig length: old 986, new 986
New start: 0