No. words: 1664; after pruning: 1638


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:943)  694  0.14 0.00 0.42  UCW033_H08_BE591275Ta16P001G09P022D051R1_050.ab1       30   751 (0)  C UCW034_H08_BE591275Ta16P001G09P022D051F1_050.ab1   (0)   913   195 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1    UCW033_H08_BE591275Ta16P001G09P022D051R1_050.ab1     1 
  147  C UCW034_H08_BE591275Ta16P001G09P022D051F1_050.ab1   799 
  151    UCW033_H08_BE591275Ta16P001G09P022D051R1_050.ab1   151 
  307  C UCW034_H08_BE591275Ta16P001G09P022D051F1_050.ab1   639 
  315    UCW033_H08_BE591275Ta16P001G09P022D051R1_050.ab1   315 
  319  C UCW034_H08_BE591275Ta16P001G09P022D051F1_050.ab1   627 
  431    UCW033_H08_BE591275Ta16P001G09P022D051R1_050.ab1   431 
  435  C UCW034_H08_BE591275Ta16P001G09P022D051F1_050.ab1   511 
Contig length: old 944, new 945

Contig length: old 945, new 945
New start: 0