No. words: 1714; after pruning: 1688


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:981)  705  0.00 0.27 0.00  UCW033_H10_BE591275Ta18P001G09P022F051R1_066.ab1      171   901 (0)  C UCW034_H10_BE591275Ta18P001G09P022F051F1_066.ab1   (0)   813    81 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  360 nodes

 182 str. conn. components

Path
    1    UCW033_H10_BE591275Ta18P001G09P022F051R1_066.ab1     1 
  607  C UCW034_H10_BE591275Ta18P001G09P022F051F1_066.ab1   377 
Contig length: old 982, new 983

Contig length: old 983, new 983
New start: 0