No. words: 1769; after pruning: 1743


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:933)  780  0.97 0.12 0.00  UCW033_C09_BE591275Ta19P001G09P022D051R1_075.ab1        1   824 (0)  C UCW034_C09_BE591275Ta19P001G09P022D051F1_075.ab1   (10)   935   111 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  394 nodes

 199 str. conn. components

Path
    1  C UCW034_C09_BE591275Ta19P001G09P022D051F1_075.ab1   945 
   21    UCW033_C09_BE591275Ta19P001G09P022D051R1_075.ab1    10 
  232  C UCW034_C09_BE591275Ta19P001G09P022D051F1_075.ab1   714 
  236    UCW033_C09_BE591275Ta19P001G09P022D051R1_075.ab1   225 
  580  C UCW034_C09_BE591275Ta19P001G09P022D051F1_075.ab1   366 
Contig length: old 945, new 945

Contig length: old 945, new 945
New start: 0 
S Change at: 50; seg lengths: entry 1, contig 1
S Change at: 54; seg lengths: entry 1, contig 1