No. words: 1497; after pruning: 1471


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:766)  594  0.48 0.00 0.00  UCW033_A11_BE591275Ta19P001G09P022F051R1_095.ab1        1   619 (0)  C UCW034_A11_BE591275Ta19P001G09P022F051F1_095.ab1   (111)   767   149 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C UCW034_A11_BE591275Ta19P001G09P022F051F1_095.ab1   878 
  116    UCW033_A11_BE591275Ta19P001G09P022F051R1_095.ab1     5 
  200  C UCW034_A11_BE591275Ta19P001G09P022F051F1_095.ab1   679 
  204    UCW033_A11_BE591275Ta19P001G09P022F051R1_095.ab1    93 
  248  C UCW034_A11_BE591275Ta19P001G09P022F051F1_095.ab1   631 
  264    UCW033_A11_BE591275Ta19P001G09P022F051R1_095.ab1   153 
  268  C UCW034_A11_BE591275Ta19P001G09P022F051F1_095.ab1   611 
  316    UCW033_A11_BE591275Ta19P001G09P022F051R1_095.ab1   205 
  320  C UCW034_A11_BE591275Ta19P001G09P022F051F1_095.ab1   559 
  332    UCW033_A11_BE591275Ta19P001G09P022F051R1_095.ab1   221 
  416  C UCW034_A11_BE591275Ta19P001G09P022F051F1_095.ab1   463 
Contig length: old 878, new 878

Contig length: old 878, new 878
New start: 0