No. words: 1475; after pruning: 1449


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:974)  491  0.00 0.00 0.00  UCW033_B11_BE591275Ta20P001G09P022F051R1_093.ab1      250   749 (0)  C UCW034_B11_BE591275Ta20P001G09P022F051F1_093.ab1   (0)   726   227 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1    UCW033_B11_BE591275Ta20P001G09P022F051R1_093.ab1     1 
  481  C UCW034_B11_BE591275Ta20P001G09P022F051F1_093.ab1   495 
  489    UCW033_B11_BE591275Ta20P001G09P022F051R1_093.ab1   489 
  493  C UCW034_B11_BE591275Ta20P001G09P022F051F1_093.ab1   483 
  501    UCW033_B11_BE591275Ta20P001G09P022F051R1_093.ab1   501 
  505  C UCW034_B11_BE591275Ta20P001G09P022F051F1_093.ab1   471 
  517    UCW033_B11_BE591275Ta20P001G09P022F051R1_093.ab1   517 
  521  C UCW034_B11_BE591275Ta20P001G09P022F051F1_093.ab1   455 
  525    UCW033_B11_BE591275Ta20P001G09P022F051R1_093.ab1   525 
  529  C UCW034_B11_BE591275Ta20P001G09P022F051F1_093.ab1   447 
  541    UCW033_B11_BE591275Ta20P001G09P022F051R1_093.ab1   541 
  549  C UCW034_B11_BE591275Ta20P001G09P022F051F1_093.ab1   427 
  553    UCW033_B11_BE591275Ta20P001G09P022F051R1_093.ab1   553 
  565  C UCW034_B11_BE591275Ta20P001G09P022F051F1_093.ab1   411 
Contig length: old 975, new 975

Contig length: old 975, new 975
New start: 0