No. words: 1110; after pruning: 1084


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.4 (1,1:987)  116  0.82 0.00 0.00  UCW033_D11_BE591275Ta22P001G09P022F051R1_089.ab1      113   234 (0)  C UCW034_D11_BE591275Ta22P001G09P022F051F1_089.ab1   (0)   876   755 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  60 nodes

 32 str. conn. components

Path
    1    UCW033_D11_BE591275Ta22P001G09P022F051R1_089.ab1     1 
  148  C UCW034_D11_BE591275Ta22P001G09P022F051F1_089.ab1   841 
  152    UCW033_D11_BE591275Ta22P001G09P022F051R1_089.ab1   152 
  160  C UCW034_D11_BE591275Ta22P001G09P022F051F1_089.ab1   829 
  168    UCW033_D11_BE591275Ta22P001G09P022F051R1_089.ab1   168 
  184  C UCW034_D11_BE591275Ta22P001G09P022F051F1_089.ab1   805 
  192    UCW033_D11_BE591275Ta22P001G09P022F051R1_089.ab1   192 
  206  C UCW034_D11_BE591275Ta22P001G09P022F051F1_089.ab1   783 
  210    UCW033_D11_BE591275Ta22P001G09P022F051R1_089.ab1   210 
  214  C UCW034_D11_BE591275Ta22P001G09P022F051F1_089.ab1   775 
  218    UCW033_D11_BE591275Ta22P001G09P022F051R1_089.ab1   218 
  226  C UCW034_D11_BE591275Ta22P001G09P022F051F1_089.ab1   763 
Contig length: old 988, new 988

Contig length: old 988, new 988
New start: 0