No. words: 1782; after pruning: 1742


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 17.2 (1,1:941)  792  0.12 0.24 0.00  UCW033_G09_BE591275Ta23P001G09P022D051R1_067.ab1      120   939 (19)  C UCW034_G09_BE591275Ta23P001G09P022D051F1_067.ab1   (0)   824     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1    UCW033_G09_BE591275Ta23P001G09P022D051R1_067.ab1     1 
  619  C UCW034_G09_BE591275Ta23P001G09P022D051F1_067.ab1   325 
  937    UCW033_G09_BE591275Ta23P001G09P022D051R1_067.ab1   935 
Contig length: old 958, new 960

Contig length: old 960, new 960
New start: 0