No. words: 1463; after pruning: 1437


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:925)  525  0.19 0.00 0.00  UCW033_E11_BE591275Ta23P001G09P022F051R1_087.ab1      253   789 (0)  C UCW034_E11_BE591275Ta23P001G09P022F051F1_087.ab1   (0)   674   138 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1    UCW033_E11_BE591275Ta23P001G09P022F051R1_087.ab1     1 
  492  C UCW034_E11_BE591275Ta23P001G09P022F051F1_087.ab1   435 
  500    UCW033_E11_BE591275Ta23P001G09P022F051R1_087.ab1   500 
  512  C UCW034_E11_BE591275Ta23P001G09P022F051F1_087.ab1   415 
  524    UCW033_E11_BE591275Ta23P001G09P022F051R1_087.ab1   524 
  532  C UCW034_E11_BE591275Ta23P001G09P022F051F1_087.ab1   395 
  544    UCW033_E11_BE591275Ta23P001G09P022F051R1_087.ab1   544 
  548  C UCW034_E11_BE591275Ta23P001G09P022F051F1_087.ab1   379 
  560    UCW033_E11_BE591275Ta23P001G09P022F051R1_087.ab1   560 
  572  C UCW034_E11_BE591275Ta23P001G09P022F051F1_087.ab1   355 
  584    UCW033_E11_BE591275Ta23P001G09P022F051R1_087.ab1   584 
  604  C UCW034_E11_BE591275Ta23P001G09P022F051F1_087.ab1   323 
Contig length: old 926, new 926

Contig length: old 926, new 926
New start: 0