No. words: 1739; after pruning: 1713


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.4 (1,1:941)  770  0.13 0.13 0.13  UCW033_D07_BE591275Td04P001G09P022D051R1_057.ab1       83   879 (0)  C UCW034_D07_BE591275Td04P001G09P022D051F1_057.ab1   (0)   860    64 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1    UCW033_D07_BE591275Td04P001G09P022D051R1_057.ab1     1 
  470  C UCW034_D07_BE591275Td04P001G09P022D051F1_057.ab1   473 
Contig length: old 942, new 942

Contig length: old 942, new 942
New start: 0