No. words: 1591; after pruning: 1565


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:963)  614  0.16 0.00 0.00  UCW033_G07_BE591275Td07P001G09P022D051R1_051.ab1      137   763 (0)  C UCW034_G07_BE591275Td07P001G09P022D051F1_051.ab1   (0)   828   202 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1    UCW033_G07_BE591275Td07P001G09P022D051R1_051.ab1     1 
  446  C UCW034_G07_BE591275Td07P001G09P022D051F1_051.ab1   519 
  450    UCW033_G07_BE591275Td07P001G09P022D051R1_051.ab1   450 
  482  C UCW034_G07_BE591275Td07P001G09P022D051F1_051.ab1   483 
  574    UCW033_G07_BE591275Td07P001G09P022D051R1_051.ab1   574 
  582  C UCW034_G07_BE591275Td07P001G09P022D051F1_051.ab1   383 
Contig length: old 964, new 964

Contig length: old 964, new 964
New start: 0