No. words: 1797; after pruning: 1757


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.9 (1,1:1452)  321  0.58 0.29 0.29  UCW018F_E05_BE636795Ld05P014C06P014C121F1_039.ab1      598   941 (0)  C UCW018R_E05_BE636795Ld05P014C06P014C121R1_039.ab1   (0)   856   513 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1    UCW018F_E05_BE636795Ld05P014C06P014C121F1_039.ab1     1 
  697  C UCW018R_E05_BE636795Ld05P014C06P014C121R1_039.ab1   757 
  701    UCW018F_E05_BE636795Ld05P014C06P014C121F1_039.ab1   701 
  709  C UCW018R_E05_BE636795Ld05P014C06P014C121R1_039.ab1   745 
  721    UCW018F_E05_BE636795Ld05P014C06P014C121F1_039.ab1   721 
  729  C UCW018R_E05_BE636795Ld05P014C06P014C121R1_039.ab1   725 
  753    UCW018F_E05_BE636795Ld05P014C06P014C121F1_039.ab1   753 
  762  C UCW018R_E05_BE636795Ld05P014C06P014C121R1_039.ab1   692 
Contig length: old 1453, new 1453

Contig length: old 1453, new 1453
New start: 0