No. words: 1832; after pruning: 1806


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:1459)  358  0.81 0.00 0.00  UCW018F_B06_BE636795Ld10P014C06P014C121F1_046.ab1      528   899 (0)  C UCW018R_B06_BE636795Ld10P014C06P014C121R1_046.ab1   (0)   933   562 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1    UCW018F_B06_BE636795Ld10P014C06P014C121F1_046.ab1     1 
  671  C UCW018R_B06_BE636795Ld10P014C06P014C121R1_046.ab1   790 
  675    UCW018F_B06_BE636795Ld10P014C06P014C121F1_046.ab1   675 
  687  C UCW018R_B06_BE636795Ld10P014C06P014C121R1_046.ab1   774 
  691    UCW018F_B06_BE636795Ld10P014C06P014C121F1_046.ab1   691 
  703  C UCW018R_B06_BE636795Ld10P014C06P014C121R1_046.ab1   758 
  707    UCW018F_B06_BE636795Ld10P014C06P014C121F1_046.ab1   707 
  715  C UCW018R_B06_BE636795Ld10P014C06P014C121R1_046.ab1   746 
  751    UCW018F_B06_BE636795Ld10P014C06P014C121F1_046.ab1   751 
  755  C UCW018R_B06_BE636795Ld10P014C06P014C121R1_046.ab1   706 
Contig length: old 1460, new 1460

Contig length: old 1460, new 1460
New start: 0