No. words: 1473; after pruning: 1447


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:912)  527  0.71 0.00 0.00  UCW002F_B02_BF201102As01P002G05G111F1_013.ab1      209   768 (0)  C UCW002R_B02_BF201102As01P002G05G111R1_013.ab1   (0)   705   146 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1    UCW002F_B02_BF201102As01P002G05G111F1_013.ab1     1 
  508  C UCW002R_B02_BF201102As01P002G05G111R1_013.ab1   406 
  512    UCW002F_B02_BF201102As01P002G05G111F1_013.ab1   512 
  520  C UCW002R_B02_BF201102As01P002G05G111R1_013.ab1   394 
  524    UCW002F_B02_BF201102As01P002G05G111F1_013.ab1   524 
  532  C UCW002R_B02_BF201102As01P002G05G111R1_013.ab1   382 
  536    UCW002F_B02_BF201102As01P002G05G111F1_013.ab1   536 
  548  C UCW002R_B02_BF201102As01P002G05G111R1_013.ab1   366 
  556    UCW002F_B02_BF201102As01P002G05G111F1_013.ab1   556 
  560  C UCW002R_B02_BF201102As01P002G05G111R1_013.ab1   354 
  564    UCW002F_B02_BF201102As01P002G05G111F1_013.ab1   564 
  572  C UCW002R_B02_BF201102As01P002G05G111R1_013.ab1   342 
  624    UCW002F_B02_BF201102As01P002G05G111F1_013.ab1   624 
  628  C UCW002R_B02_BF201102As01P002G05G111R1_013.ab1   286 
Contig length: old 913, new 913

Contig length: old 913, new 913
New start: 0