No. words: 1588; after pruning: 1562


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:967)  595  0.00 0.00 0.00  UCW002F_D02_BF201102At02P002G05G111F1_014.ab1      219   838 (0)  C UCW002R_D02_BF201102At02P002G05G111R1_014.ab1   (0)   750   131 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1    UCW002F_D02_BF201102At02P002G05G111F1_014.ab1     1 
  458  C UCW002R_D02_BF201102At02P002G05G111R1_014.ab1   511 
  462    UCW002F_D02_BF201102At02P002G05G111F1_014.ab1   462 
  470  C UCW002R_D02_BF201102At02P002G05G111R1_014.ab1   499 
  494    UCW002F_D02_BF201102At02P002G05G111F1_014.ab1   494 
  502  C UCW002R_D02_BF201102At02P002G05G111R1_014.ab1   467 
Contig length: old 968, new 968

Contig length: old 968, new 968
New start: 0