No. words: 1503; after pruning: 1477


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.7 (1,1:777)  652  0.00 0.15 0.00  UCW051_E08_BF201102Ta13P001G05P022C071R1_056.ab1        1   678 (0)  C UCW052_E08_BF201102Ta13P001G05P022C071F1_056.ab1   (46)   779   101 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  338 nodes

 171 str. conn. components

Path
    1  C UCW052_E08_BF201102Ta13P001G05P022C071F1_056.ab1   825 
   64    UCW051_E08_BF201102Ta13P001G05P022C071R1_056.ab1    17 
  144  C UCW052_E08_BF201102Ta13P001G05P022C071F1_056.ab1   682 
  148    UCW051_E08_BF201102Ta13P001G05P022C071R1_056.ab1   101 
  156  C UCW052_E08_BF201102Ta13P001G05P022C071F1_056.ab1   670 
  160    UCW051_E08_BF201102Ta13P001G05P022C071R1_056.ab1   113 
  184  C UCW052_E08_BF201102Ta13P001G05P022C071F1_056.ab1   642 
  188    UCW051_E08_BF201102Ta13P001G05P022C071R1_056.ab1   141 
  196  C UCW052_E08_BF201102Ta13P001G05P022C071F1_056.ab1   630 
  224    UCW051_E08_BF201102Ta13P001G05P022C071R1_056.ab1   177 
  228  C UCW052_E08_BF201102Ta13P001G05P022C071F1_056.ab1   598 
Contig length: old 825, new 825

Contig length: old 825, new 825
New start: 0