No. words: 1075; after pruning: 1049


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.7 (1,1:909)  146  1.21 0.00 0.61  UCW039a_E10_BF201102Ta15P001G05P022E071R1_072.ab1      259   423 (0)  C UCW040a_E10_BF201102Ta15P001G05P022E071F1_072.ab1   (0)   652   489 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  74 nodes

 39 str. conn. components

Path
    1    UCW039a_E10_BF201102Ta15P001G05P022E071R1_072.ab1     1 
  377  C UCW040a_E10_BF201102Ta15P001G05P022E071F1_072.ab1   534 
Contig length: old 910, new 910

Contig length: old 910, new 910
New start: 0