No. words: 1603; after pruning: 1577


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 16.1 (1,1:770)  743  0.00 0.00 0.13  UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1        5   771 (14)  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   (52)   766     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  382 nodes

 193 str. conn. components

Path
    1  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   818 
   72    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1    24 
   76  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   743 
   80    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1    32 
   88  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   731 
   96    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1    48 
  108  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   711 
  116    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1    68 
  124  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   695 
  136    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1    88 
  144  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   675 
  148    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1   100 
  176  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   643 
  180    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1   132 
  184  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   635 
  700    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1   652 
  708  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1   111 
  724    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1   676 
  728  C UCW052_B09_BF201102Ta18P001G05P022C071F1_077.ab1    91 
  804    UCW051_B09_BF201102Ta18P001G05P022C071R1_077.ab1   756 
Contig length: old 832, new 833

Contig length: old 833, new 833
New start: 0