No. words: 1550; after pruning: 1524


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:786)  704  0.67 0.00 0.13  UCW051_E09_BF201102Ta21P001G05P022C071R1_071.ab1        1   746 (0)  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1   (18)   786    42 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1   804 
   22    UCW051_E09_BF201102Ta21P001G05P022C071R1_071.ab1     4 
   38  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1   767 
   42    UCW051_E09_BF201102Ta21P001G05P022C071R1_071.ab1    24 
  194  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1   611 
  202    UCW051_E09_BF201102Ta21P001G05P022C071R1_071.ab1   184 
  206  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1   599 
  230    UCW051_E09_BF201102Ta21P001G05P022C071R1_071.ab1   212 
  234  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1   571 
  238    UCW051_E09_BF201102Ta21P001G05P022C071R1_071.ab1   220 
  242  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1   563 
  298    UCW051_E09_BF201102Ta21P001G05P022C071R1_071.ab1   280 
  302  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1   503 
  550    UCW051_E09_BF201102Ta21P001G05P022C071R1_071.ab1   532 
  554  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1   251 
  745    UCW051_E09_BF201102Ta21P001G05P022C071R1_071.ab1   728 
  758  C UCW052_E09_BF201102Ta21P001G05P022C071F1_071.ab1    47 
Contig length: old 804, new 804

Contig length: old 804, new 804
New start: 0