No. words: 1072; after pruning: 1046


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.5 (1,1:765)  288  0.33 0.00 0.00  UCW051_C07_BF201102Td03P001G05P022C071R1_059.ab1       78   383 (0)  C UCW052_C07_BF201102Td03P001G05P022C071F1_059.ab1   (0)   689   384 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1    UCW051_C07_BF201102Td03P001G05P022C071R1_059.ab1     1 
  173  C UCW052_C07_BF201102Td03P001G05P022C071F1_059.ab1   594 
  177    UCW051_C07_BF201102Td03P001G05P022C071R1_059.ab1   177 
  193  C UCW052_C07_BF201102Td03P001G05P022C071F1_059.ab1   574 
  197    UCW051_C07_BF201102Td03P001G05P022C071R1_059.ab1   197 
  205  C UCW052_C07_BF201102Td03P001G05P022C071F1_059.ab1   562 
  217    UCW051_C07_BF201102Td03P001G05P022C071R1_059.ab1   217 
  221  C UCW052_C07_BF201102Td03P001G05P022C071F1_059.ab1   546 
Contig length: old 766, new 766

Contig length: old 766, new 766
New start: 0