No. words: 1569; after pruning: 1543


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.2 (1,1:773)  719  0.40 0.00 0.00  UCW051_G07_BF201102Td07P001G05P022C071R1_051.ab1        1   748 (0)  C UCW052_G07_BF201102Td07P001G05P022C071F1_051.ab1   (47)   774    27 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1  C UCW052_G07_BF201102Td07P001G05P022C071F1_051.ab1   821 
   51    UCW051_G07_BF201102Td07P001G05P022C071R1_051.ab1     4 
   55  C UCW052_G07_BF201102Td07P001G05P022C071F1_051.ab1   767 
   59    UCW051_G07_BF201102Td07P001G05P022C071R1_051.ab1    12 
  139  C UCW052_G07_BF201102Td07P001G05P022C071F1_051.ab1   683 
  143    UCW051_G07_BF201102Td07P001G05P022C071R1_051.ab1    96 
  199  C UCW052_G07_BF201102Td07P001G05P022C071F1_051.ab1   623 
  203    UCW051_G07_BF201102Td07P001G05P022C071R1_051.ab1   156 
  207  C UCW052_G07_BF201102Td07P001G05P022C071F1_051.ab1   615 
  283    UCW051_G07_BF201102Td07P001G05P022C071R1_051.ab1   236 
  291  C UCW052_G07_BF201102Td07P001G05P022C071F1_051.ab1   531 
Contig length: old 821, new 821

Contig length: old 821, new 821
New start: 0