No. words: 1621; after pruning: 1595


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.6 (1,1:772)  751  0.00 0.13 0.00  UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1        1   773 (32)  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1   (42)   774     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  386 nodes

 195 str. conn. components

Path
    1  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1   816 
   68    UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1    25 
   72  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1   745 
   76    UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1    33 
  120  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1   697 
  124    UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1    81 
  140  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1   677 
  144    UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1   101 
  152  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1   665 
  156    UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1   113 
  164  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1   653 
  172    UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1   129 
  180  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1   637 
  692    UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1   649 
  700  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1   117 
  716    UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1   673 
  724  C UCW052_H07_BF201102Td08P001G05P022C071F1_049.ab1    93 
  808    UCW051_H07_BF201102Td08P001G05P022C071R1_049.ab1   765 
Contig length: old 848, new 848

Contig length: old 848, new 848
New start: 0