No. words: 1607; after pruning: 1581


Histogram of relative pair offsets, for read pairs with multiple alignments:
94     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:930)  630  0.15 0.15 0.30  UCW005F_C01_BF201348Ld03P002E02E081F1_002.ab1      183   858 (0)  C UCW005R_C01_BF201348Ld03P002E02E081R1_002.ab1   (0)   749    75 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1    UCW005F_C01_BF201348Ld03P002E02E081F1_002.ab1     1 
  442  C UCW005R_C01_BF201348Ld03P002E02E081R1_002.ab1   490 
  462    UCW005F_C01_BF201348Ld03P002E02E081F1_002.ab1   462 
  478  C UCW005R_C01_BF201348Ld03P002E02E081R1_002.ab1   454 
  490    UCW005F_C01_BF201348Ld03P002E02E081F1_002.ab1   490 
  494  C UCW005R_C01_BF201348Ld03P002E02E081R1_002.ab1   438 
  498    UCW005F_C01_BF201348Ld03P002E02E081F1_002.ab1   498 
  506  C UCW005R_C01_BF201348Ld03P002E02E081R1_002.ab1   426 
  522    UCW005F_C01_BF201348Ld03P002E02E081F1_002.ab1   522 
  534  C UCW005R_C01_BF201348Ld03P002E02E081R1_002.ab1   398 
Contig length: old 931, new 931

Contig length: old 931, new 931
New start: 0