No. words: 1564; after pruning: 1538


Histogram of relative pair offsets, for read pairs with multiple alignments:
94     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:927)  603  0.00 0.00 0.16  UCW005F_D02_BF201348Tu02P002E02E081F1_014.ab1      188   823 (0)  C UCW005R_D02_BF201348Tu02P002E02E081R1_014.ab1   (0)   741   107 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1    UCW005F_D02_BF201348Tu02P002E02E081F1_014.ab1     1 
  467  C UCW005R_D02_BF201348Tu02P002E02E081R1_014.ab1   462 
  471    UCW005F_D02_BF201348Tu02P002E02E081F1_014.ab1   471 
  483  C UCW005R_D02_BF201348Tu02P002E02E081R1_014.ab1   446 
  491    UCW005F_D02_BF201348Tu02P002E02E081F1_014.ab1   491 
  495  C UCW005R_D02_BF201348Tu02P002E02E081R1_014.ab1   434 
Contig length: old 928, new 928

Contig length: old 928, new 928
New start: 0