No. words: 1175; after pruning: 1149


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:710)  463  0.00 0.00 0.00  UCW004F_E04_BF473658As02P002C01C071F1_023.ab1      124   587 (0)  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   (0)   588   125 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1    UCW004F_E04_BF473658As02P002C01C071F1_023.ab1     1 
  285  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   427 
  289    UCW004F_E04_BF473658As02P002C01C071F1_023.ab1   289 
  293  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   419 
  301    UCW004F_E04_BF473658As02P002C01C071F1_023.ab1   301 
  313  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   399 
  317    UCW004F_E04_BF473658As02P002C01C071F1_023.ab1   317 
  325  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   387 
  337    UCW004F_E04_BF473658As02P002C01C071F1_023.ab1   337 
  349  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   363 
  365    UCW004F_E04_BF473658As02P002C01C071F1_023.ab1   365 
  369  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   343 
  377    UCW004F_E04_BF473658As02P002C01C071F1_023.ab1   377 
  381  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   331 
  385    UCW004F_E04_BF473658As02P002C01C071F1_023.ab1   385 
  393  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   319 
  401    UCW004F_E04_BF473658As02P002C01C071F1_023.ab1   401 
  405  C UCW004R_E04_BF473658As02P002C01C071R1_023.ab1   307 
Contig length: old 711, new 711

Contig length: old 711, new 711
New start: 0