No. words: 1328; after pruning: 1288


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.6 (1,1:611)  610  0.16 0.00 0.00  UCW018F_B07_BF473658Ld02P014E06P014E121F1_061.ab1        1   612 (51)  C UCW018R_B07_BF473658Ld02P014E06P014E121R1_061.ab1   (53)   612     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C UCW018R_B07_BF473658Ld02P014E06P014E121R1_061.ab1   665 
   61    UCW018F_B07_BF473658Ld02P014E06P014E121F1_061.ab1     8 
  101  C UCW018R_B07_BF473658Ld02P014E06P014E121R1_061.ab1   565 
  105    UCW018F_B07_BF473658Ld02P014E06P014E121F1_061.ab1    52 
  129  C UCW018R_B07_BF473658Ld02P014E06P014E121R1_061.ab1   537 
  189    UCW018F_B07_BF473658Ld02P014E06P014E121F1_061.ab1   136 
  513  C UCW018R_B07_BF473658Ld02P014E06P014E121R1_061.ab1   153 
  577    UCW018F_B07_BF473658Ld02P014E06P014E121F1_061.ab1   524 
  589  C UCW018R_B07_BF473658Ld02P014E06P014E121R1_061.ab1    77 
  601    UCW018F_B07_BF473658Ld02P014E06P014E121F1_061.ab1   548 
  605  C UCW018R_B07_BF473658Ld02P014E06P014E121R1_061.ab1    61 
  609    UCW018F_B07_BF473658Ld02P014E06P014E121F1_061.ab1   556 
  613  C UCW018R_B07_BF473658Ld02P014E06P014E121R1_061.ab1    53 
  648    UCW018F_B07_BF473658Ld02P014E06P014E121F1_061.ab1   595 
  652  C UCW018R_B07_BF473658Ld02P014E06P014E121R1_061.ab1    14 
  660    UCW018F_B07_BF473658Ld02P014E06P014E121F1_061.ab1   607 
Contig length: old 716, new 716

Contig length: old 716, new 716
New start: 0