No. words: 1533; after pruning: 1507


Histogram of relative pair offsets, for read pairs with multiple alignments:
66     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:778)  725  0.80 0.00 0.13  UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1        1   749 (0)  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   (6)   778    31 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   784 
   38    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1    32 
   42  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   743 
   65    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1    59 
   69  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   716 
  101    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1    95 
  113  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   672 
  121    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   115 
  129  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   656 
  133    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   127 
  137  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   648 
  157    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   151 
  161  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   624 
  165    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   159 
  169  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   616 
  199    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   194 
  243  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   542 
  247    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   242 
  307  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   478 
  315    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   310 
  319  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   466 
  327    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   322 
  351  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   434 
  371    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   366 
  379  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   406 
  383    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   378 
  387  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   398 
  391    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   386 
  407  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   378 
  415    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   410 
  423  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   362 
  431    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   426 
  447  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   338 
  471    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   466 
  483  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   302 
  607    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   602 
  639  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1   146 
  647    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   642 
  711  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1    74 
  719    UCW004F_E03_BF473658Ld05P002C01C071F1_019.ab1   714 
  727  C UCW004R_E03_BF473658Ld05P002C01C071R1_019.ab1    58 
Contig length: old 784, new 784

Contig length: old 784, new 784
New start: 0