No. words: 1412; after pruning: 1386


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:677)  669  0.00 0.00 0.00  UCW006F_E08_BG263656As01P002A04A101F1_055.ab1        1   678 (23)  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   (33)   678     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   711 
   37    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1     4 
   53  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   659 
   57    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1    24 
  101  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   611 
  113    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1    80 
  161  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   551 
  165    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   132 
  169  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   543 
  177    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   144 
  181  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   531 
  197    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   164 
  213  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   499 
  217    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   184 
  221  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   491 
  225    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   192 
  265  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   447 
  269    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   236 
  309  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   403 
  337    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   304 
  341  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   371 
  417    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   384 
  421  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   291 
  457    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   424 
  465  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   247 
  481    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   448 
  485  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   227 
  505    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   472 
  509  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   203 
  521    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   488 
  529  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   183 
  541    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   508 
  549  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   163 
  585    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   552 
  589  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1   123 
  617    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   584 
  621  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1    91 
  649    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   616 
  653  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1    59 
  689    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   656 
  693  C UCW006R_E08_BG263656As01P002A04A101R1_055.ab1    19 
  705    UCW006F_E08_BG263656As01P002A04A101F1_055.ab1   672 
Contig length: old 734, new 734

Contig length: old 734, new 734
New start: 0