No. words: 1393; after pruning: 1367


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 14.6 (1,1:669)  659  0.00 0.00 0.00  UCW006F_F08_BG263656As02P002A04A101F1_063.ab1        2   670 (30)  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   (24)   669     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  336 nodes

 170 str. conn. components

Path
    1  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   693 
   28    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1     5 
  160  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   534 
  164    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   141 
  172  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   522 
  192    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   169 
  200  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   494 
  216    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   193 
  220  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   474 
  224    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   201 
  288  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   406 
  304    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   281 
  316  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   378 
  328    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   305 
  332  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   362 
  372    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   349 
  412  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   282 
  448    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   425 
  456  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   238 
  472    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   449 
  476  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   218 
  496    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   473 
  500  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   194 
  512    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   489 
  520  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   174 
  528    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   505 
  532  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   162 
  548    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   525 
  568  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   126 
  576    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   553 
  580  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1   114 
  608    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   585 
  612  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1    82 
  628    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   605 
  632  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1    62 
  676    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   653 
  684  C UCW006R_F08_BG263656As02P002A04A101R1_063.ab1    10 
  688    UCW006F_F08_BG263656As02P002A04A101F1_063.ab1   665 
Contig length: old 723, new 723

Contig length: old 723, new 723
New start: 0