No. words: 1285; after pruning: 1259


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:624)  609  0.32 0.00 0.00  UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1        1   625 (19)  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   (16)   625     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   641 
   20    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1     4 
   24  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   618 
   40    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1    24 
   44  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   598 
   52    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1    36 
   56  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   586 
   68    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1    52 
  140  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   502 
  148    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   132 
  152  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   490 
  156    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   140 
  172  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   470 
  180    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   164 
  184  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   458 
  196    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   180 
  224  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   418 
  232    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   216 
  280  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   362 
  284    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   268 
  336  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   306 
  340    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   324 
  392  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   250 
  396    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   380 
  416  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   226 
  420    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   404 
  424  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   218 
  428    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   412 
  440  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   202 
  464    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   448 
  468  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   174 
  472    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   456 
  484  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   158 
  488    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   472 
  504  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   138 
  516    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   500 
  532  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1   110 
  544    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   528 
  552  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1    90 
  568    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   552 
  580  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1    62 
  596    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   580 
  600  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1    42 
  604    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   588 
  630  C UCW006R_D08_BG263656Tu02P002A04A101R1_062.ab1    12 
  634    UCW006F_D08_BG263656Tu02P002A04A101F1_062.ab1   618 
Contig length: old 660, new 660

Contig length: old 660, new 660
New start: 0