No. words: 1762; after pruning: 1736


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.9 (1,1:818)  792  0.12 0.12 0.00  BE352587Ld02P103C01P103C071F1_019.ab1        1   819 (69)  C BE352587Ld02P103C01P103C071R1_019.ab1   (54)   820     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  406 nodes

 205 str. conn. components

Path
    1  C BE352587Ld02P103C01P103C071R1_019.ab1   874 
   77    BE352587Ld02P103C01P103C071F1_019.ab1    22 
   85  C BE352587Ld02P103C01P103C071R1_019.ab1   790 
  103    BE352587Ld02P103C01P103C071F1_019.ab1    48 
  247  C BE352587Ld02P103C01P103C071R1_019.ab1   628 
  331    BE352587Ld02P103C01P103C071F1_019.ab1   276 
  339  C BE352587Ld02P103C01P103C071R1_019.ab1   536 
  867    BE352587Ld02P103C01P103C071F1_019.ab1   812 
Contig length: old 943, new 943

Contig length: old 943, new 943
New start: 0