No. words: 1813; after pruning: 1773


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 17.1 (1,1:820)  792  0.12 0.12 0.00  BE352587Ld03P103B01P103C071F1_077.ab1        1   818 (77)  C BE352587Ld03P103B01P103C071R1_077.ab1   (96)   822     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1  C BE352587Ld03P103B01P103C071R1_077.ab1   918 
  114    BE352587Ld03P103B01P103C071F1_077.ab1    17 
  189  C BE352587Ld03P103B01P103C071R1_077.ab1   730 
  193    BE352587Ld03P103B01P103C071F1_077.ab1    96 
  217  C BE352587Ld03P103B01P103C071R1_077.ab1   702 
  221    BE352587Ld03P103B01P103C071F1_077.ab1   124 
  233  C BE352587Ld03P103B01P103C071R1_077.ab1   686 
  241    BE352587Ld03P103B01P103C071F1_077.ab1   144 
  333  C BE352587Ld03P103B01P103C071R1_077.ab1   586 
  373    BE352587Ld03P103B01P103C071F1_077.ab1   276 
  397  C BE352587Ld03P103B01P103C071R1_077.ab1   522 
  405    BE352587Ld03P103B01P103C071F1_077.ab1   308 
  565  C BE352587Ld03P103B01P103C071R1_077.ab1   354 
  573    BE352587Ld03P103B01P103C071F1_077.ab1   476 
  625  C BE352587Ld03P103B01P103C071R1_077.ab1   294 
  669    BE352587Ld03P103B01P103C071F1_077.ab1   572 
  677  C BE352587Ld03P103B01P103C071R1_077.ab1   242 
  705    BE352587Ld03P103B01P103C071F1_077.ab1   608 
  709  C BE352587Ld03P103B01P103C071R1_077.ab1   210 
  901    BE352587Ld03P103B01P103C071F1_077.ab1   804 
Contig length: old 992, new 992

Contig length: old 992, new 992
New start: 0