No. words: 1634; after pruning: 1608


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.5 (1,1:721)  691  0.55 0.00 0.00  BE352587Ld06P103C01P103C071F1_092.ab1        1   722 (158)  C BE352587Ld06P103C01P103C071R1_092.ab1   (32)   722     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C BE352587Ld06P103C01P103C071R1_092.ab1   754 
   38    BE352587Ld06P103C01P103C071F1_092.ab1     6 
  711  C BE352587Ld06P103C01P103C071R1_092.ab1    44 
  739    BE352587Ld06P103C01P103C071F1_092.ab1   707 
  743  C BE352587Ld06P103C01P103C071R1_092.ab1    12 
  747    BE352587Ld06P103C01P103C071F1_092.ab1   715 
Contig length: old 912, new 912

Contig length: old 912, new 912
New start: 0