No. words: 1840; after pruning: 1800


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.2 (1,1:819)  798  0.12 0.00 0.00  BE352587Ld07P103B01P103C071F1_069.ab1        1   820 (107)  C BE352587Ld07P103B01P103C071R1_069.ab1   (93)   820     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1  C BE352587Ld07P103B01P103C071R1_069.ab1   913 
  111    BE352587Ld07P103B01P103C071F1_069.ab1    18 
  219  C BE352587Ld07P103B01P103C071R1_069.ab1   695 
  223    BE352587Ld07P103B01P103C071F1_069.ab1   130 
  263  C BE352587Ld07P103B01P103C071R1_069.ab1   651 
  275    BE352587Ld07P103B01P103C071F1_069.ab1   182 
  767  C BE352587Ld07P103B01P103C071R1_069.ab1   147 
  899    BE352587Ld07P103B01P103C071F1_069.ab1   806 
Contig length: old 1020, new 1020

Contig length: old 1020, new 1020
New start: 0