No. words: 1816; after pruning: 1776


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.0 (1,1:814)  789  0.12 0.12 0.00  BE352587Ld08P103B01P103C071F1_067.ab1        1   815 (90)  C BE352587Ld08P103B01P103C071R1_067.ab1   (95)   816     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1  C BE352587Ld08P103B01P103C071R1_067.ab1   911 
  110    BE352587Ld08P103B01P103C071F1_067.ab1    14 
  118  C BE352587Ld08P103B01P103C071R1_067.ab1   794 
  122    BE352587Ld08P103B01P103C071F1_067.ab1    26 
  188  C BE352587Ld08P103B01P103C071R1_067.ab1   724 
  192    BE352587Ld08P103B01P103C071F1_067.ab1    96 
  212  C BE352587Ld08P103B01P103C071R1_067.ab1   700 
  220    BE352587Ld08P103B01P103C071F1_067.ab1   124 
  656  C BE352587Ld08P103B01P103C071R1_067.ab1   256 
  664    BE352587Ld08P103B01P103C071F1_067.ab1   568 
  700  C BE352587Ld08P103B01P103C071R1_067.ab1   212 
  716    BE352587Ld08P103B01P103C071F1_067.ab1   620 
  728  C BE352587Ld08P103B01P103C071R1_067.ab1   184 
  732    BE352587Ld08P103B01P103C071F1_067.ab1   636 
  752  C BE352587Ld08P103B01P103C071R1_067.ab1   160 
  816    BE352587Ld08P103B01P103C071F1_067.ab1   720 
  820  C BE352587Ld08P103B01P103C071R1_067.ab1    92 
  896    BE352587Ld08P103B01P103C071F1_067.ab1   800 
Contig length: old 1001, new 1001

Contig length: old 1001, new 1001
New start: 0