No. words: 1705; after pruning: 1679


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 17.0 (1,1:824)  792  0.00 0.24 0.00  BE352587Tu02P103B01P103C071F1_016.ab1        1   821 (24)  C BE352587Tu02P103B01P103C071R1_016.ab1   (34)   826     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  406 nodes

 205 str. conn. components

Path
    1  C BE352587Tu02P103B01P103C071R1_016.ab1   860 
   57    BE352587Tu02P103B01P103C071F1_016.ab1    21 
  665  C BE352587Tu02P103B01P103C071R1_016.ab1   196 
  821    BE352587Tu02P103B01P103C071F1_016.ab1   785 
  825  C BE352587Tu02P103B01P103C071R1_016.ab1    36 
  841    BE352587Tu02P103B01P103C071F1_016.ab1   805 
  849  C BE352587Tu02P103B01P103C071R1_016.ab1    12 
  853    BE352587Tu02P103B01P103C071F1_016.ab1   817 
Contig length: old 880, new 881

Contig length: old 881, new 881
New start: 0