No. words: 1641; after pruning: 1615


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:925)  671  0.42 0.00 0.00  BE399500Ld05P067B01P067B071F1_064.ab1      117   831 (0)  C BE399500Ld05P067B01P067B071R1_064.ab1   (0)   810    96 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1    BE399500Ld05P067B01P067B071F1_064.ab1     1 
  708  C BE399500Ld05P067B01P067B071R1_064.ab1   219 
  712    BE399500Ld05P067B01P067B071F1_064.ab1   712 
  716  C BE399500Ld05P067B01P067B071R1_064.ab1   211 
  720    BE399500Ld05P067B01P067B071F1_064.ab1   720 
  724  C BE399500Ld05P067B01P067B071R1_064.ab1   203 
Contig length: old 926, new 926

Contig length: old 926, new 926
New start: 0