No. words: 1600; after pruning: 1574


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:931)  623  0.60 0.00 0.00  BE399500Ld07P067B01P067B071F1_060.ab1      155   822 (0)  C BE399500Ld07P067B01P067B071R1_060.ab1   (0)   778   111 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1    BE399500Ld07P067B01P067B071F1_060.ab1     1 
  681  C BE399500Ld07P067B01P067B071R1_060.ab1   252 
  685    BE399500Ld07P067B01P067B071F1_060.ab1   685 
  697  C BE399500Ld07P067B01P067B071R1_060.ab1   236 
  705    BE399500Ld07P067B01P067B071F1_060.ab1   705 
  717  C BE399500Ld07P067B01P067B071R1_060.ab1   216 
Contig length: old 932, new 932

Contig length: old 932, new 932
New start: 0